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LOC119858327 mannose-binding protein-like [ Dermochelys coriacea (leatherback sea turtle) ]

Gene ID: 119858327, updated on 8-May-2024

Summary

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Gene symbol
LOC119858327
Gene description
mannose-binding protein-like
See related
EnsemblRapid:ENSDCOG00030002806
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermochelys coriacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
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Genomic context

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See LOC119858327 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
101 current rDerCor1.pri.v4 (GCF_009764565.3) 7 NC_050074.1 (68971602..68975374)
100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 7 NC_050074.1 (68971602..68975374)

Chromosome 7 - NC_050074.1Genomic Context describing neighboring genes Neighboring gene pulmonary surfactant-associated protein D-like Neighboring gene pulmonary surfactant-associated protein D-like Neighboring gene uncharacterized LOC119858329 Neighboring gene pulmonary surfactant-associated protein A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rDerCor1.pri.v4

Genomic

  1. NC_050074.1 Reference rDerCor1.pri.v4

    Range
    68971602..68975374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038408682.1 → XP_038264610.1  mannose-binding protein-like

    Related
    ENSDCOP00030008029.1, ENSDCOT00030008392.1
    Conserved Domains (2) summary
    pfam01391
    Location:45 → 99
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:141 → 253
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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