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MFSD2B MFSD2 lysolipid transporter B, sphingolipid [ Dermochelys coriacea (leatherback sea turtle) ]

Gene ID: 119852564, updated on 8-May-2024

Summary

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Gene symbol
MFSD2B
Gene description
MFSD2 lysolipid transporter B, sphingolipid
See related
EnsemblRapid:ENSDCOG00030002930
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermochelys coriacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
Orthologs
human mouse all
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Genomic context

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See MFSD2B in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
101 current rDerCor1.pri.v4 (GCF_009764565.3) 3 NC_050070.1 (17773323..17838602, complement)
100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 3 NC_050070.1 (17775562..17838547, complement)

Chromosome 3 - NC_050070.1Genomic Context describing neighboring genes Neighboring gene WD repeat and coiled-coil-containing protein-like Neighboring gene WD repeat and coiled coil containing Neighboring gene uncharacterized LOC119852566 Neighboring gene uncharacterized LOC122459203 Neighboring gene uncharacterized LOC122459206 Neighboring gene UBX domain protein 2A Neighboring gene ATPase family AAA domain containing 2B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingolipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major facilitator superfamily domain-containing protein 2B
Names
major facilitator superfamily domain containing 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rDerCor1.pri.v4

Genomic

  1. NC_050070.1 Reference rDerCor1.pri.v4

    Range
    17773323..17838602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043510182.1 → XP_043366117.1  major facilitator superfamily domain-containing protein 2B isoform X8

    Conserved Domains (1) summary
    cl28910
    Location:51 → 399
    MFS; Major Facilitator Superfamily

  2. XM_043510181.1 → XP_043366116.1  major facilitator superfamily domain-containing protein 2B isoform X7

    Conserved Domains (1) summary
    cl28910
    Location:2 → 416
    MFS; Major Facilitator Superfamily

  3. XM_038393881.2 → XP_038249809.1  major facilitator superfamily domain-containing protein 2B isoform X6

    Conserved Domains (1) summary
    cd17452
    Location:18 → 505
    MFS_MFSD2B; Major facilitator superfamily domain-containing protein 2B

  4. XM_043510180.1 → XP_043366115.1  major facilitator superfamily domain-containing protein 2B isoform X5

    Conserved Domains (1) summary
    cl28910
    Location:53 → 472
    MFS; Major Facilitator Superfamily

  5. XM_043510178.1 → XP_043366113.1  major facilitator superfamily domain-containing protein 2B isoform X3

    Conserved Domains (1) summary
    cd17452
    Location:48 → 503
    MFS_MFSD2B; Major facilitator superfamily domain-containing protein 2B

  6. XM_043510179.1 → XP_043366114.1  major facilitator superfamily domain-containing protein 2B isoform X4

    Related
    ENSDCOP00030008401.1, ENSDCOT00030008764.1
    Conserved Domains (1) summary
    cd17452
    Location:18 → 473
    MFS_MFSD2B; Major facilitator superfamily domain-containing protein 2B

  7. XM_043510176.1 → XP_043366111.1  major facilitator superfamily domain-containing protein 2B isoform X1

    Conserved Domains (1) summary
    cd17452
    Location:49 → 536
    MFS_MFSD2B; Major facilitator superfamily domain-containing protein 2B

  8. XM_043510177.1 → XP_043366112.1  major facilitator superfamily domain-containing protein 2B isoform X2

    Conserved Domains (1) summary
    cd17452
    Location:48 → 535
    MFS_MFSD2B; Major facilitator superfamily domain-containing protein 2B
Nucleotide Protein
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