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SGCA sarcoglycan alpha [ Dermochelys coriacea (leatherback sea turtle) ]

Gene ID: 119849047, updated on 21-Mar-2024

Summary

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Gene symbol
SGCA
Gene description
sarcoglycan alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermochelys coriacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
Orthologs
human mouse all
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Genomic context

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See SGCA in Genome Data Viewer
Location:
chromosome: 27
Exon count:
11
Annotation release Status Assembly Chr Location
101 current rDerCor1.pri.v4 (GCF_009764565.3) 27 NC_050094.1 (8821728..8847900, complement)
100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 27 NC_050094.1 (8827526..8847864, complement)

Chromosome 27 - NC_050094.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122457666 Neighboring gene collagen type I alpha 1 chain Neighboring gene spermatid-specific linker histone H1-like protein Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene sterile alpha motif domain containing 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rDerCor1.pri.v4

Genomic

  1. NC_050094.1 Reference rDerCor1.pri.v4

    Range
    8821728..8847900 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038385654.2 → XP_038241582.1  alpha-sarcoglycan

    Conserved Domains (1) summary
    pfam05510
    Location:11 → 360
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

RNA

  1. XR_006277321.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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