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S100A11 S100 calcium binding protein A11 [ Dermochelys coriacea (leatherback sea turtle) ]

Gene ID: 119847799, updated on 8-May-2024

Summary

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Gene symbol
S100A11
Gene description
S100 calcium binding protein A11
See related
EnsemblRapid:ENSDCOG00030009666
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermochelys coriacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
Orthologs
human mouse all
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Genomic context

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See S100A11 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
4
Annotation release Status Assembly Chr Location
101 current rDerCor1.pri.v4 (GCF_009764565.3) 24 NC_050091.1 (2813072..2817201)
100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 24 NC_050091.1 (2813072..2817193)

Chromosome 24 - NC_050091.1Genomic Context describing neighboring genes Neighboring gene keratin-associated protein 9-1-like Neighboring gene pollen-specific leucine-rich repeat extensin-like protein 1 Neighboring gene COPI coat complex subunit alpha Neighboring gene nicastrin Neighboring gene nescient helix-loop-helix 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein S100-A11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rDerCor1.pri.v4

Genomic

  1. NC_050091.1 Reference rDerCor1.pri.v4

    Range
    2813072..2817201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038382890.2 → XP_038238818.1  protein S100-A11 isoform X2

    Related
    ENSDCOP00030027421.1, ENSDCOT00030028693.1
    Conserved Domains (1) summary
    cd05023
    Location:8 → 96
    S-100A11; S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand ...

  2. XM_043502046.1 → XP_043357981.1  protein S100-A11 isoform X1

    Conserved Domains (1) summary
    cd05023
    Location:26 → 114
    S-100A11; S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand ...
Nucleotide Protein
Heading Accession and Version

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