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PNPLA4 patatin like phospholipase domain containing 4 [ Dermochelys coriacea (leatherback sea turtle) ]

Gene ID: 119846812, updated on 18-Sep-2024

Summary

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Gene symbol
PNPLA4
Gene description
patatin like phospholipase domain containing 4
See related
EnsemblRapid:ENSDCOG00030003840
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermochelys coriacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
Orthologs
human all
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Genomic context

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See PNPLA4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
101 current rDerCor1.pri.v4 (GCF_009764565.3) 1 NC_050068.2 (130263752..130306073, complement)
100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 1 NC_050068.1 (130263755..130306097, complement)

Chromosome 1 - NC_050068.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122457008 Neighboring gene pseudouridine 5'-phosphatase Neighboring gene steroid sulfatase Neighboring gene uncharacterized LOC122457688 Neighboring gene uncharacterized LOC122457689

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rDerCor1.pri.v4

Genomic

  1. NC_050068.2 Reference rDerCor1.pri.v4

    Range
    130263752..130306073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038381023.2 → XP_038236951.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    Related
    ENSDCOP00030010885.1, ENSDCOT00030011427.1
    Conserved Domains (1) summary
    cd07222
    Location:99 → 344
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  2. XM_043500029.1 → XP_043355964.1  patatin-like phospholipase domain-containing protein 4 isoform X6

    Conserved Domains (1) summary
    cl11396
    Location:1 → 163
    Patatin_and_cPLA2; Patatins and Phospholipases

  3. XM_043500004.1 → XP_043355939.1  patatin-like phospholipase domain-containing protein 4 isoform X5

    Conserved Domains (1) summary
    cl11396
    Location:2 → 191
    Patatin_and_cPLA2; Patatins and Phospholipases

  4. XM_043499965.1 → XP_043355900.1  patatin-like phospholipase domain-containing protein 4 isoform X4

    Conserved Domains (1) summary
    cl11396
    Location:30 → 222
    Patatin_and_cPLA2; Patatins and Phospholipases

  5. XM_043499922.1 → XP_043355857.1  patatin-like phospholipase domain-containing protein 4 isoform X3

    Conserved Domains (1) summary
    cd07222
    Location:99 → 304
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  6. XM_043499888.1 → XP_043355823.1  patatin-like phospholipase domain-containing protein 4 isoform X2

    Conserved Domains (1) summary
    cd07222
    Location:99 → 304
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
Nucleotide Protein
Heading Accession and Version

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