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DERA deoxyribose-phosphate aldolase [ Dermochelys coriacea (leatherback sea turtle) ]

Gene ID: 119846774, updated on 8-May-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
EnsemblRapid:ENSDCOG00030018716
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermochelys coriacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
101 current rDerCor1.pri.v4 (GCF_009764565.3) 1 NC_050068.2 (238825048..238922651, complement)
100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 1 NC_050068.1 (238848501..238948993, complement)

Chromosome 1 - NC_050068.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 15 member 5 Neighboring gene uncharacterized LOC122460746 Neighboring gene uncharacterized LOC122460748 Neighboring gene uncharacterized LOC119862597 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene EGFR pathway substrate 8, signaling adaptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rDerCor1.pri.v4

Genomic

  1. NC_050068.2 Reference rDerCor1.pri.v4

    Range
    238825048..238922651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038380866.2 → XP_038236794.1  deoxyribose-phosphate aldolase isoform X3

    Related
    ENSDCOP00030050583.1, ENSDCOT00030055286.1
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_043517014.1 → XP_043372949.1  deoxyribose-phosphate aldolase isoform X5

    Conserved Domains (1) summary
    cd00959
    Location:50 → 242
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  3. XM_038380857.2 → XP_038236785.1  deoxyribose-phosphate aldolase isoform X2

    Related
    ENSDCOP00030050578.1, ENSDCOT00030055281.1
    Conserved Domains (1) summary
    cd00959
    Location:51 → 278
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  4. XM_043517007.1 → XP_043372942.1  deoxyribose-phosphate aldolase isoform X4

    Conserved Domains (1) summary
    cd00959
    Location:55 → 247
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  5. XM_043516988.1 → XP_043372923.1  deoxyribose-phosphate aldolase isoform X1

    Conserved Domains (1) summary
    cd00959
    Location:55 → 282
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein
Heading Accession and Version

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