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sxc O-linked N-acetylglucosamine (GlcNAc) transferase sxc [ Zerene cesonia (dogface butterfly) ]

Gene ID: 119834122, updated on 15-May-2024

Summary

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Gene symbol
sxc
Gene description
O-linked N-acetylglucosamine (GlcNAc) transferase sxc
See related
EnsemblRapid:ENSZCEG00000008451
Gene type
protein coding
RefSeq status
MODEL
Organism
Zerene cesonia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Pieridae; Coliadinae; Zerene
Orthologs
fruit fly all
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Genomic context

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See sxc in Genome Data Viewer
Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Zerene_cesonia_1.1 (GCF_012273895.1) 18 NC_052119.1 (6726389..6742203, complement)

Chromosome 18 - NC_052119.1Genomic Context describing neighboring genes Neighboring gene protein takeout-like Neighboring gene circadian clock-controlled protein daywake-like Neighboring gene protein inturned Neighboring gene uncharacterized LOC119834082

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052119.1 Chromosome 18 Reference Zerene_cesonia_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zerene cesonia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zerene_cesonia_1.1

Genomic

  1. NC_052119.1 Reference Zerene_cesonia_1.1

    Range
    6726389..6742203 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038358411.1 → XP_038214339.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    Conserved Domains (3) summary
    TIGR02917
    Location:29 → 557
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:249 → 276
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:499 → 1033
    Glyco_transf_41; Glycosyl transferase family 41

  2. XM_038358412.1 → XP_038214340.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    Related
    ENSZCEP00000012754.1, ENSZCET00000014068.1
    Conserved Domains (3) summary
    TIGR02917
    Location:13 → 365
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:57 → 84
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:307 → 841
    Glyco_transf_41; Glycosyl transferase family 41
Nucleotide Protein
Heading Accession and Version

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