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C1GalTA Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Zerene cesonia (dogface butterfly) ]

Gene ID: 119830789, updated on 24-May-2024

Summary

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Gene symbol
C1GalTA
Gene description
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
See related
EnsemblRapid:ENSZCEG00000009691
Gene type
protein coding
RefSeq status
MODEL
Organism
Zerene cesonia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Pieridae; Coliadinae; Zerene
Orthologs
fruit fly all
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Genomic context

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See C1GalTA in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Zerene_cesonia_1.1 (GCF_012273895.1) 12 NC_052113.1 (1270628..1283558, complement)

Chromosome 12 - NC_052113.1Genomic Context describing neighboring genes Neighboring gene Protein C kinase 53E Neighboring gene bombyxin A-3 homolog Neighboring gene rac GTPase-activating protein 1-like Neighboring gene uncharacterized LOC119830690 Neighboring gene peroxisomal membrane protein PEX14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052113.1 Chromosome 12 Reference Zerene_cesonia_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zerene cesonia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zerene_cesonia_1.1

Genomic

  1. NC_052113.1 Reference Zerene_cesonia_1.1

    Range
    1270628..1283558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038353931.1 → XP_038209859.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    Related
    ENSZCEP00000014593.1, ENSZCET00000016061.1
    Conserved Domains (1) summary
    cl21608
    Location:109 → 267
    Galactosyl_T; Galactosyltransferase

  2. XM_038353932.1 → XP_038209860.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    Related
    ENSZCEP00000014620.1, ENSZCET00000016088.1
    Conserved Domains (1) summary
    cl21608
    Location:105 → 263
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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