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Mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119827993, updated on 21-Mar-2024

Summary

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Gene symbol
Mgat5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
EnsemblRapid:ENSAAPG00005022304
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Mgat5 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
17
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 12 NC_052058.2 (92558563..92853396, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 12 NC_052058.1 (92558563..92853396, complement)

Chromosome 12 - NC_052058.2Genomic Context describing neighboring genes Neighboring gene aminocarboxymuconate semialdehyde decarboxylase Neighboring gene transmembrane protein 163 Neighboring gene small nucleolar RNA U6-53/MBII-28 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC119799560

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052058.2 Reference mArvAmp1.2

    Range
    92558563..92853396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038349993.2 → XP_038205921.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    Conserved Domains (2) summary
    pfam15027
    Location:3 → 137
    DUF4525; Domain of unknown function (DUF4525)
    pfam15024
    Location:171 → 725
    Glyco_transf_18; Glycosyltransferase family 18

  2. XM_038349992.2 → XP_038205920.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    Related
    ENSAAPP00005028531.1, ENSAAPT00005031452.2
    Conserved Domains (2) summary
    pfam15027
    Location:3 → 137
    DUF4525; Domain of unknown function (DUF4525)
    pfam15024
    Location:171 → 725
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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