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B4galt3 beta-1,4-galactosyltransferase 3 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119827977, updated on 21-Mar-2024

Summary

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Gene symbol
B4galt3
Gene description
beta-1,4-galactosyltransferase 3
See related
EnsemblRapid:ENSAAPG00005022741
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See B4galt3 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 12 NC_052058.2 (22622615..22629114, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 12 NC_052058.1 (22622615..22629114, complement)

Chromosome 12 - NC_052058.2Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 21 Neighboring gene protoporphyrinogen oxidase Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 4 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052058.2 Reference mArvAmp1.2

    Range
    22622615..22629114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038349972.1 → XP_038205900.1  beta-1,4-galactosyltransferase 3

    Conserved Domains (1) summary
    cd00899
    Location:124 → 343
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_038349970.1 → XP_038205898.1  beta-1,4-galactosyltransferase 3

    Conserved Domains (1) summary
    cd00899
    Location:124 → 343
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_038349971.1 → XP_038205899.1  beta-1,4-galactosyltransferase 3

    Conserved Domains (1) summary
    cd00899
    Location:124 → 343
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_038349973.1 → XP_038205901.1  beta-1,4-galactosyltransferase 3

    Related
    ENSAAPP00005029087.1, ENSAAPT00005032068.2
    Conserved Domains (1) summary
    cd00899
    Location:124 → 343
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
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