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Fut9 fucosyltransferase 9 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119826896, updated on 21-Mar-2024

Summary

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Gene symbol
Fut9
Gene description
fucosyltransferase 9
See related
EnsemblRapid:ENSAAPG00005014656
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Fut9 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 11 NC_052057.2 (82447954..82449033)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 11 NC_052057.1 (96942549..96943628, complement)

Chromosome 11 - NC_052057.2Genomic Context describing neighboring genes Neighboring gene four and a half LIM domains 5 Neighboring gene UFM1 specific ligase 1 Neighboring gene U1 small nuclear ribonucleoprotein A Neighboring gene mannosidase endo-alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052057.2 Reference mArvAmp1.2

    Range
    82447954..82449033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038348408.1 → XP_038204336.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

    Related
    ENSAAPP00005018792.1, ENSAAPT00005020577.2
    Conserved Domains (2) summary
    pfam00852
    Location:185 → 354
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 169
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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