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Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119826589, updated on 21-Mar-2024

Summary

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Gene symbol
Galnt12
Gene description
polypeptide N-acetylgalactosaminyltransferase 12
See related
EnsemblRapid:ENSAAPG00005016579
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Galnt12 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 11 NC_052057.2 (99394173..99422539)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 11 NC_052057.1 (79969043..79997409, complement)

Chromosome 11 - NC_052057.2Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type B receptor subunit 2 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 6 Neighboring gene collagen type XV alpha 1 chain Neighboring gene transforming growth factor beta receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052057.2 Reference mArvAmp1.2

    Range
    99394173..99422539
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038347994.1 → XP_038203922.1  polypeptide N-acetylgalactosaminyltransferase 12

    Related
    ENSAAPP00005021283.1, ENSAAPT00005023345.2
    Conserved Domains (2) summary
    cd02510
    Location:140 → 434
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:448 → 577
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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