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B4galt1 beta-1,4-galactosyltransferase 1 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119826215, updated on 21-Mar-2024

Summary

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Gene symbol
B4galt1
Gene description
beta-1,4-galactosyltransferase 1
See related
EnsemblRapid:ENSAAPG00005024201
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See B4galt1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 11 NC_052057.2 (94205546..94252919, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 11 NC_052057.1 (85138662..85186036)

Chromosome 11 - NC_052057.2Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member A1 Neighboring gene SMU1 DNA replication regulator and spliceosomal factor Neighboring gene serine peptidase inhibitor Kazal type 4 Neighboring gene BAG cochaperone 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052057.2 Reference mArvAmp1.2

    Range
    94205546..94252919 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038347334.2 → XP_038203262.1  beta-1,4-galactosyltransferase 1

    Related
    ENSAAPP00005031096.1, ENSAAPT00005034262.2
    Conserved Domains (2) summary
    cd00899
    Location:175 → 393
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    PHA03247
    Location:45 → 140
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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