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Asph aspartate beta-hydroxylase [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119826126, updated on 21-Mar-2024

Summary

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Gene symbol
Asph
Gene description
aspartate beta-hydroxylase
See related
EnsemblRapid:ENSAAPG00005014708
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Asph in Genome Data Viewer
Location:
chromosome: 11
Exon count:
26
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 11 NC_052057.2 (116897039..117060488, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 11 NC_052057.1 (62331091..62494666)

Chromosome 11 - NC_052057.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene clavesin 1 Neighboring gene U1 spliceosomal RNA Neighboring gene 60 kDa heat shock protein, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052057.2 Reference mArvAmp1.2

    Range
    116897039..117060488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038347167.2 → XP_038203095.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

    Related
    ENSAAPP00005019244.2, ENSAAPT00005021072.2
    Conserved Domains (4) summary
    pfam05279
    Location:65 → 309
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:325 → 513
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:444 → 468
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:577 → 731
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  2. XM_038347168.2 → XP_038203096.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

    Related
    ENSAAPP00005019366.1, ENSAAPT00005021204.2
    Conserved Domains (1) summary
    pfam05279
    Location:65 → 226
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
Nucleotide Protein
Heading Accession and Version

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