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Gal3st4 galactose-3-O-sulfotransferase 4 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119825667, updated on 21-Mar-2024

Summary

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Gene symbol
Gal3st4
Gene description
galactose-3-O-sulfotransferase 4
See related
EnsemblRapid:ENSAAPG00005017527
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Gal3st4 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 10 NC_052056.1 (96187756..96194099)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 10 NC_052056.1 (96187756..96194099)

Chromosome 10 - NC_052056.1Genomic Context describing neighboring genes Neighboring gene STAG3 cohesin complex component Neighboring gene glypican 2 Neighboring gene trafficking protein particle complex subunit 14 Neighboring gene NXPE family member 3-like Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052056.1 Reference mArvAmp1.2

    Range
    96187756..96194099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038346684.1 → XP_038202612.1  galactose-3-O-sulfotransferase 4

    Related
    ENSAAPP00005022464.1, ENSAAPT00005024675.2
    Conserved Domains (1) summary
    cl22970
    Location:1 → 459
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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