U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B4galt4 beta-1,4-galactosyltransferase 4 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119824226, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
B4galt4
Gene description
beta-1,4-galactosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B4galt4 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 10 NC_052056.1 (40211958..40230073)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 10 NC_052056.1 (40211958..40230073)

Chromosome 10 - NC_052056.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 39A Neighboring gene Rho GTPase activating protein 31 Neighboring gene uroplakin 1B Neighboring gene testis expressed 55

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: beta-1,4-galactosyltransferase 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052056.1 Reference mArvAmp1.2

    Range
    40211958..40230073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042055809.1 → XP_041911743.1  LOW QUALITY PROTEIN: beta-1,4-galactosyltransferase 4

    Conserved Domains (2) summary
    cd00899
    Location:122 → 458
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    PTZ00189
    Location:227 → 266
    PTZ00189; 60S ribosomal protein L21; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.