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Kirrel2 kirre like nephrin family adhesion molecule 2 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119821413, updated on 21-Mar-2024

Summary

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Gene symbol
Kirrel2
Gene description
kirre like nephrin family adhesion molecule 2
See related
EnsemblRapid:ENSAAPG00005010168
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Kirrel2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 8 NC_052054.1 (79753608..79762146, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 8 NC_052054.1 (79753608..79762146, complement)

Chromosome 8 - NC_052054.1Genomic Context describing neighboring genes Neighboring gene NFKB inhibitor delta Neighboring gene amyloid beta precursor like protein 1 Neighboring gene NPHS1 adhesion molecule, nephrin Neighboring gene proline dehydrogenase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052054.1 Reference mArvAmp1.2

    Range
    79753608..79762146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038340413.1 → XP_038196341.1  kin of IRRE-like protein 2

    Related
    ENSAAPP00005013193.1, ENSAAPT00005014449.1
    Conserved Domains (3) summary
    pfam13927
    Location:21 → 103
    Ig_3; Immunoglobulin domain
    cd00096
    Location:395 → 399
    Ig; Ig strand A [structural motif]
    cl11960
    Location:394 → 498
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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