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Fut8 fucosyltransferase 8 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119819583, updated on 21-Mar-2024

Summary

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Gene symbol
Fut8
Gene description
fucosyltransferase 8
See related
EnsemblRapid:ENSAAPG00005008676
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Fut8 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 7 NC_052053.1 (101181634..101396266, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 7 NC_052053.1 (101181634..101396266, complement)

Chromosome 7 - NC_052053.1Genomic Context describing neighboring genes Neighboring gene gephyrin Neighboring gene ephrin type-A receptor 7-like Neighboring gene coiled-coil domain containing 196 Neighboring gene U1 spliceosomal RNA Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene thymosin beta-10-like Neighboring gene eukaryotic translation initiation factor 2 subunit 1-like Neighboring gene calmodulin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein 6-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,6)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052053.1 Reference mArvAmp1.2

    Range
    101181634..101396266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038337846.1 → XP_038193774.1  alpha-(1,6)-fucosyltransferase

    Related
    ENSAAPP00005011175.1, ENSAAPT00005012251.2
    Conserved Domains (3) summary
    cd11300
    Location:174 → 499
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:506 → 560
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1579
    Location:42 → 233
    COG1579; Predicted nucleic acid-binding protein, contains Zn-ribbon domain [General function prediction only]

  2. XM_038337844.1 → XP_038193772.1  alpha-(1,6)-fucosyltransferase

    Conserved Domains (3) summary
    cd11300
    Location:174 → 499
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:506 → 560
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1579
    Location:42 → 233
    COG1579; Predicted nucleic acid-binding protein, contains Zn-ribbon domain [General function prediction only]

  3. XM_038337845.1 → XP_038193773.1  alpha-(1,6)-fucosyltransferase

    Conserved Domains (3) summary
    cd11300
    Location:174 → 499
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:506 → 560
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1579
    Location:42 → 233
    COG1579; Predicted nucleic acid-binding protein, contains Zn-ribbon domain [General function prediction only]

  4. XM_038337843.1 → XP_038193771.1  alpha-(1,6)-fucosyltransferase

    Conserved Domains (3) summary
    cd11300
    Location:174 → 499
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:506 → 560
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1579
    Location:42 → 233
    COG1579; Predicted nucleic acid-binding protein, contains Zn-ribbon domain [General function prediction only]
Nucleotide Protein
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