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Zbtb6 zinc finger and BTB domain containing 6 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119818712, updated on 21-Mar-2024

Summary

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Gene symbol
Zbtb6
Gene description
zinc finger and BTB domain containing 6
See related
EnsemblRapid:ENSAAPG00005025412
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 7 NC_052053.1 (57062782..57067866)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 7 NC_052053.1 (57062782..57067866)

Chromosome 7 - NC_052053.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 Neighboring gene uncharacterized LOC119818589 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene phosducin like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052053.1 Reference mArvAmp1.2

    Range
    57062782..57067866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038336459.1 → XP_038192387.1  zinc finger and BTB domain-containing protein 6

    Related
    ENSAAPP00005034143.1, ENSAAPT00005039752.1
    Conserved Domains (4) summary
    sd00017
    Location:327 → 347
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:325 → 347
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:339 → 363
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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