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Gcnt2 glucosaminyl (N-acetyl) transferase 2 (I blood group) [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119817453, updated on 21-Mar-2024

Summary

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Gene symbol
Gcnt2
Gene description
glucosaminyl (N-acetyl) transferase 2 (I blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Gcnt2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 6 NC_052052.2 (138643978..138644911)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 6 NC_052052.1 (53686831..53687764)

Chromosome 6 - NC_052052.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119817122 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene transcription factor AP-2 alpha Neighboring gene N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase-like Neighboring gene chromosome 6 C6orf52 homolog Neighboring gene PAK1 interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052052.2 Reference mArvAmp1.2

    Range
    138643978..138644911
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038334686.1 → XP_038190614.1  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase

    Conserved Domains (1) summary
    cl27418
    Location:95 → 302
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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