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B4galt2 beta-1,4-galactosyltransferase 2 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119816903, updated on 21-Mar-2024

Summary

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Gene symbol
B4galt2
Gene description
beta-1,4-galactosyltransferase 2
See related
EnsemblRapid:ENSAAPG00005006439
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See B4galt2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 6 NC_052052.2 (32752943..32762917)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 6 NC_052052.1 (106720396..106730370)

Chromosome 6 - NC_052052.2Genomic Context describing neighboring genes Neighboring gene diphthamide biosynthesis 2 Neighboring gene ATPase H+ transporting V0 subunit b Neighboring gene coiled-coil domain containing 24 Neighboring gene solute carrier family 6 member 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052052.2 Reference mArvAmp1.2

    Range
    32752943..32762917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038333970.1 → XP_038189898.1  beta-1,4-galactosyltransferase 2 isoform X2

    Conserved Domains (1) summary
    cd00899
    Location:142 → 358
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_038333972.1 → XP_038189900.1  beta-1,4-galactosyltransferase 2 isoform X2

    Conserved Domains (1) summary
    cd00899
    Location:142 → 358
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_038333969.1 → XP_038189897.1  beta-1,4-galactosyltransferase 2 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:178 → 394
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_038333971.1 → XP_038189899.1  beta-1,4-galactosyltransferase 2 isoform X3

    Conserved Domains (1) summary
    cd00899
    Location:178 → 356
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  5. XM_038333968.1 → XP_038189896.1  beta-1,4-galactosyltransferase 2 isoform X1

    Related
    ENSAAPP00005008299.2, ENSAAPT00005009082.2
    Conserved Domains (1) summary
    cd00899
    Location:178 → 394
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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