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B3galt6 beta-1,3-galactosyltransferase 6 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119816893, updated on 21-Mar-2024

Summary

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Gene symbol
B3galt6
Gene description
beta-1,3-galactosyltransferase 6
See related
EnsemblRapid:ENSAAPG00005010429
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See B3galt6 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 6 NC_052052.2 (411025..412916)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 6 NC_052052.1 (74378478..74380369)

Chromosome 6 - NC_052052.2Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 4 Neighboring gene stromal cell derived factor 4 Neighboring gene C1q and TNF related 12 Neighboring gene ubiquitin conjugating enzyme E2 J2 Neighboring gene uncharacterized LOC119817567

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052052.2 Reference mArvAmp1.2

    Range
    411025..412916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038333945.1 → XP_038189873.1  beta-1,3-galactosyltransferase 6

    Related
    ENSAAPP00005013485.1, ENSAAPT00005014774.2
    Conserved Domains (1) summary
    cl21608
    Location:65 → 256
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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