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Chst9 carbohydrate sulfotransferase 9 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119815496, updated on 21-Mar-2024

Summary

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Gene symbol
Chst9
Gene description
carbohydrate sulfotransferase 9
See related
EnsemblRapid:ENSAAPG00005005134
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 5 NC_052051.1 (93289249..93544380)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 5 NC_052051.1 (93289249..93544380)

Chromosome 5 - NC_052051.1Genomic Context describing neighboring genes Neighboring gene cadherin 2 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene M-phase phosphoprotein 6-like Neighboring gene aquaporin 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052051.1 Reference mArvAmp1.2

    Range
    93289249..93544380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038331644.1 → XP_038187572.1  carbohydrate sulfotransferase 9

    Related
    ENSAAPP00005035291.1, ENSAAPT00005035582.1
    Conserved Domains (1) summary
    pfam03567
    Location:194 → 423
    Sulfotransfer_2; Sulfotransferase family

  2. XM_038331643.1 → XP_038187571.1  carbohydrate sulfotransferase 9

    Related
    ENSAAPP00005006607.2, ENSAAPT00005007236.2
    Conserved Domains (1) summary
    pfam03567
    Location:194 → 423
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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