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Galnt1 polypeptide N-acetylgalactosaminyltransferase 1 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119814469, updated on 21-Mar-2024

Summary

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Gene symbol
Galnt1
Gene description
polypeptide N-acetylgalactosaminyltransferase 1
See related
EnsemblRapid:ENSAAPG00005007959
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Galnt1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 5 NC_052051.1 (101950454..101995165)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 5 NC_052051.1 (101950454..101995165)

Chromosome 5 - NC_052051.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha chain-like Neighboring gene INO80 complex subunit C Neighboring gene uncharacterized LOC119815662 Neighboring gene chromosome 5 C18orf21 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052051.1 Reference mArvAmp1.2

    Range
    101950454..101995165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038330224.1 → XP_038186152.1  polypeptide N-acetylgalactosaminyltransferase 1

    Related
    ENSAAPP00005010231.1, ENSAAPT00005011228.2
    Conserved Domains (2) summary
    cd02510
    Location:119 → 419
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:432 → 548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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