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Dpy19l1 dpy-19 like C-mannosyltransferase 1 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119809797, updated on 21-Mar-2024

Summary

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Gene symbol
Dpy19l1
Gene description
dpy-19 like C-mannosyltransferase 1
See related
EnsemblRapid:ENSAAPG00005016937
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Dpy19l1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
23
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 3 NC_052049.1 (92825826..92936133, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 3 NC_052049.1 (92825826..92936133, complement)

Chromosome 3 - NC_052049.1Genomic Context describing neighboring genes Neighboring gene protein FAM229B-like Neighboring gene neuropeptide S receptor 1 Neighboring gene probable C-mannosyltransferase DPY19L2 Neighboring gene 40S ribosomal protein S3a-like Neighboring gene T-box transcription factor 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052049.1 Reference mArvAmp1.2

    Range
    92825826..92936133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038322933.2 → XP_038178861.1  probable C-mannosyltransferase DPY19L1 isoform X2

    Conserved Domains (1) summary
    pfam10034
    Location:1 → 615
    Dpy19; Q-cell neuroblast polarisation

  2. XM_038322932.2 → XP_038178860.1  probable C-mannosyltransferase DPY19L1 isoform X1

    Conserved Domains (2) summary
    pfam01391
    Location:34 → 72
    Collagen; Collagen triple helix repeat (20 copies)
    pfam10034
    Location:105 → 743
    Dpy19; Q-cell neuroblast polarisation

  3. XM_042054773.1 → XP_041910707.1  probable C-mannosyltransferase DPY19L1 isoform X1

    Related
    ENSAAPP00005021715.1, ENSAAPT00005023822.2
    Conserved Domains (2) summary
    pfam01391
    Location:34 → 72
    Collagen; Collagen triple helix repeat (20 copies)
    pfam10034
    Location:105 → 743
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
Heading Accession and Version

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