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Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119809071, updated on 21-Mar-2024

Summary

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Gene symbol
Stt3b
Gene description
STT3 oligosaccharyltransferase complex catalytic subunit B
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Stt3b in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 3 NC_052049.1 (180660600..180733678, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 3 NC_052049.1 (180660600..180733678, complement)

Chromosome 3 - NC_052049.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 10 Neighboring gene uncharacterized LOC119810566 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene uncharacterized LOC119809072 Neighboring gene 60S ribosomal protein L32-like Neighboring gene uncharacterized LOC119810688

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052049.1 Reference mArvAmp1.2

    Range
    180660600..180733678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038321770.1 → XP_038177698.1  LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    Conserved Domains (1) summary
    pfam02516
    Location:69 → 561
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

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