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Pigb phosphatidylinositol glycan anchor biosynthesis class B [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119808858, updated on 21-Mar-2024

Summary

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Gene symbol
Pigb
Gene description
phosphatidylinositol glycan anchor biosynthesis class B
See related
EnsemblRapid:ENSAAPG00005000896
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Pigb in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 3 NC_052049.1 (141628774..141647853, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 3 NC_052049.1 (141628774..141647853, complement)

Chromosome 3 - NC_052049.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 4 Neighboring gene U6 spliceosomal RNA Neighboring gene piercer of microtubule wall 2 Neighboring gene cell cycle progression 1 Neighboring gene PIGB opposite strand 1 Neighboring gene RAB27A, member RAS oncogene family Neighboring gene uncharacterized LOC119809414 Neighboring gene phosphatidylinositol 5-phosphate 4-kinase type-2 beta-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052049.1 Reference mArvAmp1.2

    Range
    141628774..141647853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038321347.1 → XP_038177275.1  GPI mannosyltransferase 3 isoform X4

    Conserved Domains (1) summary
    cl21590
    Location:22 → 454
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_038321345.1 → XP_038177273.1  GPI mannosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:22 → 501
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_038321346.1 → XP_038177274.1  GPI mannosyltransferase 3 isoform X3

    Conserved Domains (1) summary
    cl21590
    Location:22 → 469
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_038321343.1 → XP_038177271.1  GPI mannosyltransferase 3 isoform X1

    Related
    ENSAAPP00005001108.1, ENSAAPT00005001240.2
    Conserved Domains (1) summary
    cl21590
    Location:22 → 516
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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