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LOC119807548 zinc finger Ran-binding domain-containing protein 2 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119807548, updated on 16-Nov-2023

Summary

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Gene symbol
LOC119807548
Gene description
zinc finger Ran-binding domain-containing protein 2
See related
EnsemblRapid:ENSAAPG00005001880
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
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Genomic context

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See LOC119807548 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 2 NC_052048.2 (18375007..18377582)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 2 NC_052048.1 (18375007..18377583)

Chromosome 2 - NC_052048.2Genomic Context describing neighboring genes Neighboring gene vacuolar fusion protein MON1 homolog B-like Neighboring gene acidic proline-rich protein HP43A-like Neighboring gene ferritin heavy chain-like Neighboring gene transcription factor BTF3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipopolysaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger Ran-binding domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052048.2 Reference mArvAmp1.2

    Range
    18375007..18377582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038319566.2 → XP_038175494.1  zinc finger Ran-binding domain-containing protein 2

    Related
    ENSAAPP00005002405.2, ENSAAPT00005002639.2
    Conserved Domains (2) summary
    smart00547
    Location:67 → 91
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:13 → 34
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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