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Piga phosphatidylinositol glycan anchor biosynthesis class A [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119805331, updated on 21-Mar-2024

Summary

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Gene symbol
Piga
Gene description
phosphatidylinositol glycan anchor biosynthesis class A
See related
EnsemblRapid:ENSAAPG00005019074
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Piga in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) X NC_052065.1 (10047263..10062543)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) X NC_052065.1 (10047263..10062551)

Chromosome X - NC_052065.1Genomic Context describing neighboring genes Neighboring gene pirin Neighboring gene vascular endothelial growth factor D Neighboring gene ankyrin repeat and SOCS box containing 11 Neighboring gene chromobox protein homolog 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol N-acetylglucosaminyltransferase subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052065.1 Reference mArvAmp1.2

    Range
    10047263..10062543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038317287.2 → XP_038173215.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X1

    Conserved Domains (1) summary
    cd03796
    Location:34 → 433
    GT4_PIG-A-like; phosphatidylinositol N-acetylglucosaminyltransferase subunit A and similar proteins

  2. XM_038317285.2 → XP_038173213.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X1

    Conserved Domains (1) summary
    cd03796
    Location:34 → 433
    GT4_PIG-A-like; phosphatidylinositol N-acetylglucosaminyltransferase subunit A and similar proteins

  3. XM_038317292.2 → XP_038173220.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X4

    Conserved Domains (1) summary
    cl10013
    Location:5 → 200
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  4. XM_038317286.2 → XP_038173214.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X1

    Conserved Domains (1) summary
    cd03796
    Location:34 → 433
    GT4_PIG-A-like; phosphatidylinositol N-acetylglucosaminyltransferase subunit A and similar proteins

  5. XM_038317290.2 → XP_038173218.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X3

    Related
    ENSAAPP00005024479.2, ENSAAPT00005026910.2
    Conserved Domains (1) summary
    cl10013
    Location:15 → 209
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  6. XM_038317288.2 → XP_038173216.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X2

    Conserved Domains (1) summary
    cl10013
    Location:43 → 236
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  7. XM_038317289.2 → XP_038173217.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X3

    Conserved Domains (1) summary
    cl10013
    Location:15 → 209
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
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