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LOC119804675 UDP-N-acetylglucosamine transferase subunit ALG13 homolog [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119804675, updated on 16-Nov-2023

Summary

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Gene symbol
LOC119804675
Gene description
UDP-N-acetylglucosamine transferase subunit ALG13 homolog
See related
EnsemblRapid:ENSAAPG00005016784
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
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Genomic context

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See LOC119804675 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) X NC_052065.1 (96761697..96778438)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) X NC_052065.1 (96761697..96778438)

Chromosome X - NC_052065.1Genomic Context describing neighboring genes Neighboring gene serine rich and transmembrane domain containing 2 Neighboring gene glutamine synthetase-like Neighboring gene putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 Neighboring gene transient receptor potential cation channel subfamily C member 5 Neighboring gene TRPC5 opposite strand Neighboring gene uncharacterized LOC119804159

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine transferase subunit ALG13 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052065.1 Reference mArvAmp1.2

    Range
    96761697..96778438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038316223.1 → XP_038172151.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog isoform X2

    Conserved Domains (1) summary
    cl10013
    Location:5 → 120
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  2. XM_038316222.1 → XP_038172150.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog isoform X1

    Related
    ENSAAPP00005021496.1, ENSAAPT00005023581.2
    Conserved Domains (1) summary
    cl10013
    Location:5 → 120
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version

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