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Washc4 WASH complex subunit 4 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119803523, updated on 21-Mar-2024

Summary

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Gene symbol
Washc4
Gene description
WASH complex subunit 4
See related
EnsemblRapid:ENSAAPG00005017633
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Washc4 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
38
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 17 NC_052063.2 (2762048..2822884, complement)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 17 NC_052063.1 (21103013..21163849, complement)

Chromosome 17 - NC_052063.2Genomic Context describing neighboring genes Neighboring gene cofilin-1-like Neighboring gene chromosome 17 C12orf75 homolog Neighboring gene adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 Neighboring gene aldehyde dehydrogenase 1 family member L2 Neighboring gene NOP protein chaperone 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052063.2 Reference mArvAmp1.2

    Range
    2762048..2822884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038314896.2 → XP_038170824.1  WASH complex subunit 4

    Related
    ENSAAPP00005022584.1, ENSAAPT00005024808.2
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:32 → 600
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal

RNA

  1. XR_005283657.2 RNA Sequence

  2. XR_005283656.2 RNA Sequence

  3. XR_005283661.2 RNA Sequence

  4. XR_005283658.2 RNA Sequence

  5. XR_005283660.2 RNA Sequence

  6. XR_005283659.2 RNA Sequence

  7. XR_005283654.2 RNA Sequence

  8. XR_005283655.1 RNA Sequence

  9. XR_006020685.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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