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Gal3st1 galactose-3-O-sulfotransferase 1 [ Arvicola amphibius (Eurasian water vole) ]

Gene ID: 119801867, updated on 21-Mar-2024

Summary

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Gene symbol
Gal3st1
Gene description
galactose-3-O-sulfotransferase 1
See related
EnsemblRapid:ENSAAPG00005004611
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicola amphibius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
Orthologs
human mouse all
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Genomic context

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See Gal3st1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current mArvAmp1.2 (GCF_903992535.2) 1 NC_052047.1 (68159337..68161374)
100 previous assembly mArvAmp1.1 (GCF_903992535.1) 1 NC_052047.1 (68159337..68161374)

Chromosome 1 - NC_052047.1Genomic Context describing neighboring genes Neighboring gene transcobalamin 2 Neighboring gene pescadillo ribosomal biogenesis factor 1 Neighboring gene uncharacterized LOC119827605 Neighboring gene SEC14-like protein 4 Neighboring gene SEC14-like protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvAmp1.2

Genomic

  1. NC_052047.1 Reference mArvAmp1.2

    Range
    68159337..68161374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038312597.1 → XP_038168525.1  galactosylceramide sulfotransferase

    Related
    ENSAAPP00005005965.1, ENSAAPT00005006523.2
    Conserved Domains (1) summary
    pfam06990
    Location:4 → 408
    Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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