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rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Cyprinodon tularosa ]

Gene ID: 119796121, updated on 21-Mar-2024

Summary

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Gene symbol
rfng
Gene description
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon tularosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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See rfng in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1607723v1 (GCF_016077235.1) Unplaced Scaffold NW_024039271.1 (266920..279981)

NW_024039271.1Genomic Context describing neighboring genes Neighboring gene caveolae-associated protein 1-like Neighboring gene ATPase H+ transporting V0 subunit a1b Neighboring gene putative per-hexamer repeat protein 5 Neighboring gene dicarbonyl/L-xylulose reductase Neighboring gene Rac family small GTPase 3b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024039271 Unplaced Scaffold Reference ASM1607723v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase radical fringe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon tularosa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607723v1

Genomic

  1. NW_024039271.1 Reference ASM1607723v1

    Range
    266920..279981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038304533.1 → XP_038160461.1  beta-1,3-N-acetylglucosaminyltransferase radical fringe

    Conserved Domains (1) summary
    pfam02434
    Location:73 → 322
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

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