U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EXOSC1 exosome component 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 119717299, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
EXOSC1
Gene description
exosome component 1
See related
EnsemblRapid:ENSAPLG00030018142
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See EXOSC1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 6 NC_051777.1 (23257063..23258398)

Chromosome 6 - NC_051777.1Genomic Context describing neighboring genes Neighboring gene MMS19 homolog, cytosolic iron-sulfur assembly component Neighboring gene zinc finger DHHC-type palmitoyltransferase 16 Neighboring gene phosphoglycerate mutase 1 Neighboring gene ribosomal RNA processing 12 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_051777.1 Chromosome 6 Reference ZJU1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
exosome complex component CSL4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051777.1 Reference ZJU1.0 Primary Assembly

    Range
    23257063..23258398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038181010.1 → XP_038036938.1  exosome complex component CSL4

    Related
    ENSAPLP00030030319.1, ENSAPLT00030046950.1
    Conserved Domains (2) summary
    cd05791
    Location:62 → 154
    S1_CSL4; CSL4, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. ScCSL4 protein is a subunit of the exosome complex. The exosome plays a central role in 3' to 5' RNA processing and degradation in ...
    pfam14382
    Location:8 → 39
    ECR1_N; Exosome complex exonuclease RRP4 N-terminal region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.