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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 119713802, updated on 21-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
EnsemblRapid:ENSAPLG00030009152
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
15
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 26 NC_051797.1 (1442316..1464977, complement)

Chromosome 26 - NC_051797.1Genomic Context describing neighboring genes Neighboring gene SLAM family member 5-like Neighboring gene SLAM family member 8-like Neighboring gene natural killer cell receptor 2B4-like Neighboring gene CD48 antigen-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051797.1 Chromosome 26 Reference ZJU1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051797.1 Reference ZJU1.0 Primary Assembly

    Range
    1442316..1464977 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038167901.1 → XP_038023829.1  kin of IRRE-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B9TCP1
    Conserved Domains (4) summary
    pfam13927
    Location:264 → 329
    Ig_3; Immunoglobulin domain
    cd00096
    Location:281 → 285
    Ig; Ig strand B [structural motif]
    cd05759
    Location:78 → 175
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:347 → 444
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains

  2. XM_038167900.1 → XP_038023828.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B9TCP1
    Related
    ENSAPLP00030017321.1, ENSAPLT00030023882.1
    Conserved Domains (5) summary
    pfam13927
    Location:308 → 373
    Ig_3; Immunoglobulin domain
    cd00096
    Location:325 → 329
    Ig; Ig strand B [structural motif]
    cd05759
    Location:122 → 219
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:391 → 488
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:22 → 116
    Ig; Immunoglobulin domain
Nucleotide Protein
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