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LOC119713770 mothers against decapentaplegic homolog 4-like [ Anas platyrhynchos (mallard) ]

Gene ID: 119713770, updated on 7-Dec-2023

Summary

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Gene symbol
LOC119713770
Gene description
mothers against decapentaplegic homolog 4-like
See related
EnsemblRapid:ENSAPLG00030018199
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
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Genomic context

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See LOC119713770 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
13
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 26 NC_051797.1 (2096173..2103260)

Chromosome 26 - NC_051797.1Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein A1 Neighboring gene chromatin target of PRMT1 Neighboring gene interleukin enhancer binding factor 2 Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051797.1 Chromosome 26 Reference ZJU1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables I-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heteromeric SMAD protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mothers against decapentaplegic homolog 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051797.1 Reference ZJU1.0 Primary Assembly

    Range
    2096173..2103260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038167792.1 → XP_038023720.1  mothers against decapentaplegic homolog 4-like isoform X1

    Conserved Domains (2) summary
    cd10492
    Location:10 → 133
    MH1_SMAD_4; N-terminal Mad Homology 1 (MH1) domain in SMAD4
    cd10498
    Location:328 → 549
    MH2_SMAD_4; C-terminal Mad Homology 2 (MH2) domain in SMAD4

  2. XM_038167794.1 → XP_038023722.1  mothers against decapentaplegic homolog 4-like isoform X2

    Related
    ENSAPLP00030030441.1, ENSAPLT00030047173.1
    Conserved Domains (2) summary
    cd10492
    Location:10 → 133
    MH1_SMAD_4; N-terminal Mad Homology 1 (MH1) domain in SMAD4
    cd10498
    Location:300 → 521
    MH2_SMAD_4; C-terminal Mad Homology 2 (MH2) domain in SMAD4

  3. XM_038167795.1 → XP_038023723.1  mothers against decapentaplegic homolog 4-like isoform X3

    Related
    ENSAPLP00030030394.1, ENSAPLT00030047087.1
    Conserved Domains (2) summary
    cd10492
    Location:10 → 133
    MH1_SMAD_4; N-terminal Mad Homology 1 (MH1) domain in SMAD4
    cd10498
    Location:293 → 514
    MH2_SMAD_4; C-terminal Mad Homology 2 (MH2) domain in SMAD4

  4. XM_038167793.1 → XP_038023721.1  mothers against decapentaplegic homolog 4-like isoform X1

    Related
    ENSAPLP00030030355.1, ENSAPLT00030047014.1
    Conserved Domains (2) summary
    cd10492
    Location:10 → 133
    MH1_SMAD_4; N-terminal Mad Homology 1 (MH1) domain in SMAD4
    cd10498
    Location:328 → 549
    MH2_SMAD_4; C-terminal Mad Homology 2 (MH2) domain in SMAD4
Nucleotide Protein
Heading Accession and Version

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