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COG1 component of oligomeric golgi complex 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 119713244, updated on 21-Mar-2024

Summary

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Gene symbol
COG1
Gene description
component of oligomeric golgi complex 1
See related
EnsemblRapid:ENSAPLG00030013791
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See COG1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
14
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 19 NC_051790.1 (1427149..1435783, complement)

Chromosome 19 - NC_051790.1Genomic Context describing neighboring genes Neighboring gene CDC42 effector protein 4 Neighboring gene cleavage and polyadenylation specific factor 4 like Neighboring gene mitochondrial nucleoid associated protein 1 Neighboring gene VCP nuclear cofactor family member 1 Neighboring gene somatostatin receptor 2 Neighboring gene solute carrier family 39 member 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051790.1 Chromosome 19 Reference ZJU1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051790.1 Reference ZJU1.0 Primary Assembly

    Range
    1427149..1435783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038165591.1 → XP_038021519.1  LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 1

    UniProtKB/TrEMBL
    A0A8B9QWN4
    Related
    ENSAPLP00030024072.1, ENSAPLT00030035593.1
    Conserved Domains (1) summary
    pfam08700
    Location:50 → 105
    Vps51; Vps51/Vps67
Nucleotide Protein
Heading Accession and Version

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