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LOC119661308 endocuticle structural glycoprotein SgAbd-3-like [ Hermetia illucens (black soldier fly) ]

Gene ID: 119661308, updated on 7-Dec-2023

Summary

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Gene symbol
LOC119661308
Gene description
endocuticle structural glycoprotein SgAbd-3-like
Locus tag
HERILL_LOCUS1021
See related
EnsemblRapid:LOC119661308
Gene type
protein coding
RefSeq status
MODEL
Organism
Hermetia illucens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Stratiomyomorpha; Stratiomyidae; Hermetiinae; Hermetia
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Genomic context

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See LOC119661308 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
100 current iHerIll2.2.curated.20191125 (GCF_905115235.1) 1 NC_051849.1 (54535204..54536681)

Chromosome 1 - NC_051849.1Genomic Context describing neighboring genes Neighboring gene protein Shroom Neighboring gene uncharacterized LOC119647244 Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene uncharacterized LOC119649245 Neighboring gene uncharacterized LOC119649227 Neighboring gene mediator of RNA polymerase II transcription subunit 15-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051849.1 Chromosome 1 Reference iHerIll2.2.curated.20191125 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of chitin-based larval cuticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chitin-based extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endocuticle structural glycoprotein SgAbd-3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hermetia illucens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iHerIll2.2.curated.20191125 Primary Assembly

Genomic

  1. NC_051849.1 Reference iHerIll2.2.curated.20191125 Primary Assembly

    Range
    54535204..54536681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038070600.1 → XP_037926528.1  endocuticle structural glycoprotein SgAbd-3-like

    UniProtKB/TrEMBL
    A0A7R8YPS6
    Related
    XP_037926528.1, XM_038070600.1
    Conserved Domains (1) summary
    pfam00379
    Location:75 → 122
    Chitin_bind_4; Insect cuticle protein
Nucleotide Protein
Heading Accession and Version

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