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LOC119658065 delta-sarcoglycan [ Hermetia illucens (black soldier fly) ]

Gene ID: 119658065, updated on 10-May-2024

Summary

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Gene symbol
LOC119658065
Gene description
delta-sarcoglycan
Locus tag
HERILL_LOCUS12413
See related
EnsemblRapid:LOC119658065
Gene type
protein coding
RefSeq status
MODEL
Organism
Hermetia illucens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Stratiomyomorpha; Stratiomyidae; Hermetiinae; Hermetia
Orthologs
fruit fly all
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Genomic context

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See LOC119658065 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
100 current iHerIll2.2.curated.20191125 (GCF_905115235.1) 5 NC_051853.1 (13515792..13608954)

Chromosome 5 - NC_051853.1Genomic Context describing neighboring genes Neighboring gene pinin-like Neighboring gene uncharacterized LOC119658375 Neighboring gene probable E3 ubiquitin-protein ligase bre1 Neighboring gene cingulin-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051853.1 Chromosome 5 Reference iHerIll2.2.curated.20191125 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hermetia illucens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iHerIll2.2.curated.20191125 Primary Assembly

Genomic

  1. NC_051853.1 Reference iHerIll2.2.curated.20191125 Primary Assembly

    Range
    13515792..13608954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038065318.1 → XP_037921246.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7R8UZP3
    Related
    XP_037921246.1, XM_038065318.1
    Conserved Domains (1) summary
    pfam04790
    Location:178 → 438
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_038065322.1 → XP_037921250.1  delta-sarcoglycan isoform X2

    Related
    XP_037921250.1, XM_038065322.1
    Conserved Domains (1) summary
    pfam04790
    Location:94 → 351
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_038065319.1 → XP_037921247.1  delta-sarcoglycan isoform X2

    Related
    XP_037921247.1, XM_038065319.1
    Conserved Domains (1) summary
    pfam04790
    Location:94 → 351
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_038065321.1 → XP_037921249.1  delta-sarcoglycan isoform X2

    Related
    XP_037921249.1, XM_038065321.1
    Conserved Domains (1) summary
    pfam04790
    Location:94 → 351
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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