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Chsy Chondroitin sulfate synthase [ Hermetia illucens (black soldier fly) ]

Gene ID: 119657195, updated on 23-May-2024

Summary

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Gene symbol
Chsy
Gene description
Chondroitin sulfate synthase
Locus tag
HERILL_LOCUS13702
See related
EnsemblRapid:LOC119657195
Gene type
protein coding
RefSeq status
MODEL
Organism
Hermetia illucens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Stratiomyomorpha; Stratiomyidae; Hermetiinae; Hermetia
Orthologs
fruit fly all
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Genomic context

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See Chsy in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
100 current iHerIll2.2.curated.20191125 (GCF_905115235.1) 5 NC_051853.1 (82771133..82789061, complement)

Chromosome 5 - NC_051853.1Genomic Context describing neighboring genes Neighboring gene ribosome biogenesis protein NOP53 Neighboring gene dnaJ homolog subfamily C member 25 homolog Neighboring gene uncharacterized LOC119657196 Neighboring gene dorsal-ventral patterning protein Sog Neighboring gene uncharacterized LOC119657861

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051853.1 Chromosome 5 Reference iHerIll2.2.curated.20191125 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hermetia illucens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iHerIll2.2.curated.20191125 Primary Assembly

Genomic

  1. NC_051853.1 Reference iHerIll2.2.curated.20191125 Primary Assembly

    Range
    82771133..82789061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038063999.1 → XP_037919927.1  chondroitin sulfate synthase 1

    UniProtKB/TrEMBL
    A0A7R8YZI1
    Related
    XP_037919927.1, XM_038063999.1
    Conserved Domains (2) summary
    pfam05679
    Location:220 → 809
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:70 → 250
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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