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sxc O-linked N-acetylglucosamine (GlcNAc) transferase sxc [ Hermetia illucens (black soldier fly) ]

Gene ID: 119646910, updated on 15-May-2024

Summary

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Gene symbol
sxc
Gene description
O-linked N-acetylglucosamine (GlcNAc) transferase sxc
Locus tag
HERILL_LOCUS1803
See related
EnsemblRapid:LOC119646910
Gene type
protein coding
RefSeq status
MODEL
Organism
Hermetia illucens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Stratiomyomorpha; Stratiomyidae; Hermetiinae; Hermetia
Orthologs
fruit fly all
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Genomic context

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See sxc in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
100 current iHerIll2.2.curated.20191125 (GCF_905115235.1) 1 NC_051849.1 (109291767..109406775)

Chromosome 1 - NC_051849.1Genomic Context describing neighboring genes Neighboring gene DNA polymerase epsilon subunit 3 Chrac-14 Neighboring gene anaphase promoting complex subunit morula Neighboring gene nucleoside diphosphate kinase Neighboring gene esterase B1-like Neighboring gene esterase B1-like Neighboring gene esterase B1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051849.1 Chromosome 1 Reference iHerIll2.2.curated.20191125 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hermetia illucens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iHerIll2.2.curated.20191125 Primary Assembly

Genomic

  1. NC_051849.1 Reference iHerIll2.2.curated.20191125 Primary Assembly

    Range
    109291767..109406775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038047581.1 → XP_037903509.1  LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

    Related
    XP_037903509.1, XM_038047581.1
    Conserved Domains (3) summary
    TIGR02917
    Location:38 → 557
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:249 → 276
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:499 → 1030
    Glyco_transf_41; Glycosyl transferase family 41
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases