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Hcf Host cell factor [ Glossina fuscipes ]

Gene ID: 119643653, updated on 24-May-2024

Summary

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Gene symbol
Hcf
Gene description
Host cell factor
See related
VectorBase:GQX74_009698
Gene type
protein coding
RefSeq status
MODEL
Organism
Glossina fuscipes
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Hippoboscoidea; Glossinidae; Glossina
Orthologs
fruit fly all
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Genomic context

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See Hcf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Yale_Gfus_2 (GCF_014805625.1) Unplaced Scaffold NW_024003726.1 (67962..83475, complement)

NW_024003726.1Genomic Context describing neighboring genes Neighboring gene pre-mRNA-processing factor 19-like Neighboring gene cytosol aminopeptidase-like Neighboring gene uncharacterized LOC119643655 Neighboring gene organic cation transporter protein-like Neighboring gene choline/ethanolaminephosphotransferase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024003726 Unplaced Scaffold Reference Yale_Gfus_2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glossina fuscipes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Yale_Gfus_2

Genomic

  1. NW_024003726.1 Reference Yale_Gfus_2

    Range
    67962..83475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038043041.1 → XP_037898969.1  host cell factor isoform X4

    UniProtKB/TrEMBL
    A0A9C6E367
    Conserved Domains (3) summary
    PLN02193
    Location:69 → 377
    PLN02193; nitrile-specifier protein
    sd00038
    Location:256 → 309
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:374 → 410
    Kelch_5; Kelch motif

  2. XM_038043036.1 → XP_037898964.1  host cell factor isoform X4

    UniProtKB/TrEMBL
    A0A9C6E367
    Conserved Domains (3) summary
    PLN02193
    Location:69 → 377
    PLN02193; nitrile-specifier protein
    sd00038
    Location:256 → 309
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:374 → 410
    Kelch_5; Kelch motif

  3. XM_038043040.1 → XP_037898968.1  host cell factor isoform X8

    UniProtKB/TrEMBL
    A0A9C6E0R9
    Conserved Domains (3) summary
    PLN02193
    Location:79 → 387
    PLN02193; nitrile-specifier protein
    sd00038
    Location:266 → 319
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:384 → 420
    Kelch_5; Kelch motif

  4. XM_038043037.1 → XP_037898965.1  host cell factor isoform X5

    UniProtKB/TrEMBL
    A0A9C5ZC35
    Conserved Domains (3) summary
    PLN02193
    Location:79 → 387
    PLN02193; nitrile-specifier protein
    sd00038
    Location:266 → 319
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:384 → 420
    Kelch_5; Kelch motif

  5. XM_038043035.1 → XP_037898963.1  host cell factor isoform X3

    UniProtKB/TrEMBL
    A0A9C5ZG34
    Conserved Domains (4) summary
    PLN02193
    Location:79 → 387
    PLN02193; nitrile-specifier protein
    sd00038
    Location:266 → 319
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:384 → 420
    Kelch_5; Kelch motif
    cl41773
    Location:478 → 902
    SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4

  6. XM_038043033.1 → XP_037898961.1  host cell factor isoform X1

    UniProtKB/TrEMBL
    A0A9C5ZHP7
    Conserved Domains (4) summary
    PLN02193
    Location:79 → 387
    PLN02193; nitrile-specifier protein
    sd00038
    Location:266 → 319
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:384 → 420
    Kelch_5; Kelch motif
    cl41773
    Location:478 → 902
    SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4

  7. XM_038043039.1 → XP_037898967.1  host cell factor isoform X7

    UniProtKB/TrEMBL
    A0A9C6E0H4
    Conserved Domains (3) summary
    PLN02193
    Location:79 → 387
    PLN02193; nitrile-specifier protein
    sd00038
    Location:266 → 319
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:384 → 420
    Kelch_5; Kelch motif

  8. XM_038043034.1 → XP_037898962.1  host cell factor isoform X2

    UniProtKB/TrEMBL
    A0A9C5ZPG9
    Conserved Domains (4) summary
    PLN02193
    Location:79 → 387
    PLN02193; nitrile-specifier protein
    sd00038
    Location:266 → 319
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:384 → 416
    Kelch_5; Kelch motif
    cl41773
    Location:476 → 900
    SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4

  9. XM_038043038.1 → XP_037898966.1  host cell factor isoform X6

    UniProtKB/TrEMBL
    A0A9C6DQ64
    Conserved Domains (3) summary
    PLN02193
    Location:79 → 387
    PLN02193; nitrile-specifier protein
    sd00038
    Location:266 → 319
    Kelch; KELCH repeat [structural motif]
    pfam13854
    Location:384 → 420
    Kelch_5; Kelch motif
Nucleotide Protein
Heading Accession and Version

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