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MED23 mediator complex subunit 23 [ Penaeus monodon (black tiger shrimp) ]

Gene ID: 119584517, updated on 3-Jul-2024

Summary

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Gene symbol
MED23
Gene description
mediator complex subunit 23
See related
EnsemblRapid:LOC119584517
Gene type
protein coding
RefSeq status
MODEL
Organism
Penaeus monodon
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
Orthologs
fruit fly all
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Genomic context

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See MED23 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
28
Annotation release Status Assembly Chr Location
100 current NSTDA_Pmon_1 (GCF_015228065.1) 18 NC_051403.1 (43655758..43676265, complement)

Chromosome 18 - NC_051403.1Genomic Context describing neighboring genes Neighboring gene steroid hormone receptor ERR2-like Neighboring gene patatin-like phospholipase domain-containing protein 2 Neighboring gene uncharacterized LOC119584518 Neighboring gene nidogen-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051403.1 Chromosome 18 Reference NSTDA_Pmon_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Penaeus monodon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NSTDA_Pmon_1 Primary Assembly

Genomic

  1. NC_051403.1 Reference NSTDA_Pmon_1 Primary Assembly

    Range
    43655758..43676265 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037933169.1 → XP_037789097.1  mediator of RNA polymerase II transcription subunit 23-like isoform X1

    Related
    XP_037789097.1, XM_037933169.1
    Conserved Domains (2) summary
    PRK13914
    Location:1414 → 1480
    PRK13914; invasion associated endopeptidase
    pfam11573
    Location:9 → 1374
    Med23; Mediator complex subunit 23

  2. XM_037933172.1 → XP_037789100.1  mediator of RNA polymerase II transcription subunit 23-like isoform X4

    Related
    XP_037789100.1, XM_037933172.1
    Conserved Domains (2) summary
    PRK13914
    Location:1410 → 1476
    PRK13914; invasion associated endopeptidase
    pfam11573
    Location:9 → 1370
    Med23; Mediator complex subunit 23

  3. XM_037933170.1 → XP_037789098.1  mediator of RNA polymerase II transcription subunit 23-like isoform X2

    Related
    XP_037789098.1, XM_037933170.1
    Conserved Domains (2) summary
    PRK13914
    Location:1413 → 1479
    PRK13914; invasion associated endopeptidase
    pfam11573
    Location:9 → 1373
    Med23; Mediator complex subunit 23

  4. XM_037933171.1 → XP_037789099.1  mediator of RNA polymerase II transcription subunit 23-like isoform X3

    Related
    XP_037789099.1, XM_037933171.1
    Conserved Domains (2) summary
    PRK13914
    Location:1411 → 1477
    PRK13914; invasion associated endopeptidase
    pfam11573
    Location:9 → 1371
    Med23; Mediator complex subunit 23
Nucleotide Protein
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