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LOC119580850 cobalamin trafficking protein CblD-like [ Penaeus monodon (black tiger shrimp) ]

Gene ID: 119580850, updated on 1-Jul-2024

Summary

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Gene symbol
LOC119580850
Gene description
cobalamin trafficking protein CblD-like
See related
EnsemblRapid:LOC119580850
Gene type
protein coding
RefSeq status
MODEL
Organism
Penaeus monodon
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
Orthologs
fruit fly all
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Genomic context

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See LOC119580850 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
100 current NSTDA_Pmon_1 (GCF_015228065.1) 14 NC_051399.1 (8375897..8388672)

Chromosome 14 - NC_051399.1Genomic Context describing neighboring genes Neighboring gene GDP-L-fucose synthase-like protein Neighboring gene uncharacterized LOC119580560 Neighboring gene uncharacterized LOC119580852 Neighboring gene regulator of microtubule dynamics protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051399.1 Chromosome 14 Reference NSTDA_Pmon_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cobalamin trafficking protein CblD-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Penaeus monodon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NSTDA_Pmon_1 Primary Assembly

Genomic

  1. NC_051399.1 Reference NSTDA_Pmon_1 Primary Assembly

    Range
    8375897..8388672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037929006.1 → XP_037784934.1  cobalamin trafficking protein CblD-like isoform X1

    Related
    XP_037784934.1, XM_037929006.1
    Conserved Domains (1) summary
    pfam10229
    Location:28 → 294
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_037929007.1 → XP_037784935.1  cobalamin trafficking protein CblD-like isoform X2

    Related
    XP_037784935.1, XM_037929007.1
    Conserved Domains (1) summary
    pfam10229
    Location:28 → 292
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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