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LOC119580728 anoctamin-4-like [ Penaeus monodon (black tiger shrimp) ]

Gene ID: 119580728, updated on 7-Dec-2023

Summary

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Gene symbol
LOC119580728
Gene description
anoctamin-4-like
See related
EnsemblRapid:LOC119580728
Gene type
protein coding
RefSeq status
MODEL
Organism
Penaeus monodon
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
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Genomic context

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See LOC119580728 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
18
Annotation release Status Assembly Chr Location
100 current NSTDA_Pmon_1 (GCF_015228065.1) 14 NC_051399.1 (44759537..44802389)

Chromosome 14 - NC_051399.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCHC domain-containing protein 10-like Neighboring gene pro-resilin-like Neighboring gene Hus1-like checkpoint clamp component Neighboring gene neuroguidin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051399.1 Chromosome 14 Reference NSTDA_Pmon_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Penaeus monodon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NSTDA_Pmon_1 Primary Assembly

Genomic

  1. NC_051399.1 Reference NSTDA_Pmon_1 Primary Assembly

    Range
    44759537..44802389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037928825.1 → XP_037784753.1  anoctamin-4-like

    Related
    XP_037784753.1, XM_037928825.1
    Conserved Domains (2) summary
    pfam04547
    Location:290 → 750
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:73 → 287
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
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