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RAB3IP RAB3A interacting protein [ Choloepus didactylus (southern two-toed sloth) ]

Gene ID: 119541642, updated on 21-Mar-2024

Summary

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Gene symbol
RAB3IP
Gene description
RAB3A interacting protein
See related
EnsemblRapid:ENSCDIG00005019373
Gene type
protein coding
RefSeq status
MODEL
Organism
Choloepus didactylus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Pilosa; Folivora; Megalonychidae; Choloepus
Orthologs
human mouse all
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Genomic context

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See RAB3IP in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
100 current mChoDid1.pri (GCF_015220235.1) 8 NC_051314.1 (61241552..61305426, complement)

Chromosome 8 - NC_051314.1Genomic Context describing neighboring genes Neighboring gene CCR4-NOT transcription complex subunit 2 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10-like Neighboring gene myelin regulatory factor like Neighboring gene uncharacterized LOC119541644 Neighboring gene bestrophin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051314.1 Chromosome 8 Reference mChoDid1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi to plasma membrane transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab-3A-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Choloepus didactylus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mChoDid1.pri Primary Assembly

Genomic

  1. NC_051314.1 Reference mChoDid1.pri Primary Assembly

    Range
    61241552..61305426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037845720.1 → XP_037701648.1  rab-3A-interacting protein isoform X2

    Related
    ENSCDIP00005027438.1, ENSCDIT00005030975.1
    Conserved Domains (3) summary
    COG4372
    Location:98 → 240
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:173 → 241
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:266 → 458
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)

  2. XM_037845721.1 → XP_037701649.1  rab-3A-interacting protein isoform X3

    Conserved Domains (3) summary
    COG4372
    Location:118 → 260
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:193 → 261
    Sec2p; GDP/GTP exchange factor Sec2p
    cl41767
    Location:286 → 435
    Rab11BD_RAB3IP_like; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP), Rab-3A-interacting-like protein 1 (RAB3IL1) and similar proteins

  3. XM_037845722.1 → XP_037701650.1  rab-3A-interacting protein isoform X4

    Related
    ENSCDIP00005027552.1, ENSCDIT00005031098.1
    Conserved Domains (3) summary
    COG4372
    Location:118 → 260
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:193 → 261
    Sec2p; GDP/GTP exchange factor Sec2p
    cl41767
    Location:286 → 397
    Rab11BD_RAB3IP_like; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP), Rab-3A-interacting-like protein 1 (RAB3IL1) and similar proteins

  4. XM_037845719.1 → XP_037701647.1  rab-3A-interacting protein isoform X1

    Related
    ENSCDIP00005027357.1, ENSCDIT00005030868.1
    Conserved Domains (3) summary
    COG4372
    Location:118 → 260
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:193 → 261
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:286 → 478
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)
Nucleotide Protein
Heading Accession and Version

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