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poglut1 protein O-glucosyltransferase 1 [ Nematolebias whitei (Rio pearlfish) ]

Gene ID: 119428681, updated on 21-Mar-2024

Summary

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Gene symbol
poglut1
Gene description
protein O-glucosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematolebias whitei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias
Orthologs
human zebrafish all
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Genomic context

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See poglut1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
11
Annotation release Status Assembly Chr Location
100.20210725 current NemWhi1 (GCF_014905685.2) 23 NC_056520.1 (9403567..9413278)
100 previous assembly NemWhi1 (GCF_014905685.1) Unplaced Scaffold NW_023618568.1 (9403567..9413278)

Chromosome 23 - NC_056520.1Genomic Context describing neighboring genes Neighboring gene VANGL planar cell polarity protein 1 Neighboring gene calsequestrin-2-like Neighboring gene ATP binding cassette subfamily C member 4 (PEL blood group) Neighboring gene claudin 10e

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematolebias whitei Updated Annotation Release 100.20210725

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NemWhi1

Genomic

  1. NC_056520.1 Reference NemWhi1

    Range
    9403567..9413278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037696353.1 → XP_037552281.1  protein O-glucosyltransferase 1

    Conserved Domains (1) summary
    cl23835
    Location:44 → 377
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
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Gene LinkOut

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