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ano5b anoctamin 5b [ Nematolebias whitei (Rio pearlfish) ]

Gene ID: 119427738, updated on 21-Mar-2024

Summary

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Gene symbol
ano5b
Gene description
anoctamin 5b
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematolebias whitei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias
Orthologs
zebrafish all
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Genomic context

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See ano5b in Genome Data Viewer
Location:
chromosome: 2
Exon count:
20
Annotation release Status Assembly Chr Location
100.20210725 current NemWhi1 (GCF_014905685.2) 2 NC_056499.1 (1724664..1758160, complement)
100 previous assembly NemWhi1 (GCF_014905685.1) Unplaced Scaffold NW_023618547.1 (1724664..1758160, complement)

Chromosome 2 - NC_056499.1Genomic Context describing neighboring genes Neighboring gene growth arrest-specific 2b Neighboring gene solute carrier family 17 member 6b Neighboring gene immunoglobulin superfamily DCC subclass member 3 Neighboring gene immunoglobulin superfamily DCC subclass member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematolebias whitei Updated Annotation Release 100.20210725

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NemWhi1

Genomic

  1. NC_056499.1 Reference NemWhi1

    Range
    1724664..1758160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037695380.1 → XP_037551308.1  anoctamin-5b

    Conserved Domains (2) summary
    pfam04547
    Location:278 → 859
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:59 → 275
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
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