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fut7 fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [ Nematolebias whitei (Rio pearlfish) ]

Gene ID: 119424556, updated on 8-Aug-2024

Summary

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Gene symbol
fut7
Gene description
fucosyltransferase 7 (alpha (1,3) fucosyltransferase)
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematolebias whitei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias
Orthologs
human zebrafish all
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Genomic context

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See fut7 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
100.20210725 current NemWhi1 (GCF_014905685.2) 18 NC_056515.1 (31748884..31751286, complement)
100 previous assembly NemWhi1 (GCF_014905685.1) Unplaced Scaffold NW_023618563.1 (31748884..31751286, complement)

Chromosome 18 - NC_056515.1Genomic Context describing neighboring genes Neighboring gene neural proliferation, differentiation and control, 1a Neighboring gene POU domain, class 5, transcription factor 3 Neighboring gene chloride intracellular channel 3 Neighboring gene patatin-like phospholipase domain containing 7a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematolebias whitei Updated Annotation Release 100.20210725

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NemWhi1

Genomic

  1. NC_056515.1 Reference NemWhi1

    Range
    31748884..31751286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037692042.1 → XP_037547970.1  alpha-(1,3)-fucosyltransferase 7

    Conserved Domains (2) summary
    pfam00852
    Location:178 → 348
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:48 → 159
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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Gene LinkOut

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