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b3gnt2b UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [ Nematolebias whitei (Rio pearlfish) ]

Gene ID: 119414145, updated on 21-Mar-2024

Summary

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Gene symbol
b3gnt2b
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematolebias whitei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias
Orthologs
human zebrafish all
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Genomic context

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See b3gnt2b in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
100.20210725 current NemWhi1 (GCF_014905685.2) 1 NC_056498.1 (93148843..93150202, complement)
100 previous assembly NemWhi1 (GCF_014905685.1) Unplaced Scaffold NW_023618546.1 (93148843..93150202, complement)

Chromosome 1 - NC_056498.1Genomic Context describing neighboring genes Neighboring gene EH domain binding protein 1 Neighboring gene orthodenticle homeobox 1 Neighboring gene 40S ribosomal protein S15-like Neighboring gene uncharacterized LOC119407831 Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene myotubularin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematolebias whitei Updated Annotation Release 100.20210725

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NemWhi1

Genomic

  1. NC_056498.1 Reference NemWhi1

    Range
    93148843..93150202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037681271.1 → XP_037537199.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    Conserved Domains (1) summary
    cl21608
    Location:155 → 347
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases